All good advise.
To install the pressure seals, i use a pair if cir-clip pliers, the ones with a rounded nose as to not damage the seal. I use that to twist the seal into a W shape and push it into the gland nut where you took it out of. It may look nasty to the seal, but they are made to handle it.
A tip to get the nut to crack on the piston is to put it back into the machine and use a pin to hold it in place, then haul on it with a bar to remove the nut. This saves you needing a helper and a long bar to hold the rod while you crack and re-install the nut.
Clean the threads of the rod and use a little loctite on it too. This will ensure it doesn't loosen on you at a later day.